Publications of S Choi

Plagwitz, L.; Choi, S.; Yu, X.; Segelcke, D.; Lambers, H.; Pogatzki-Zahn, E.; Varghese, J.; Faber, C.; Pradier, B.: Data-driven time series analysis of sensory cortical processing using high-resolution fMRI across different studies. Biomedical Signal Processing and Control 93, 106136 (2024)

Choi, S.; Hike, D.; Pohmann, R.; Avdievich, N.; Gomez-Cid, L.; Man, W.; Scheffler, K.; Yu, X.: Alpha-180 spin-echo based line-scanning method for high resolution laminar-specific fMRI in animals. Imaging Neuroscience 2, pp. 1 - 14 (2024)

Choi, S.; Chen, Y.; Zeng, H.; Biswal, B.; Yu, X.: Identifying the distinct spectral dynamics of laminar-specific interhemispheric connectivity with bilateral line-scanning fMRI. Journal of Cerebral Blood Flow and Metabolism 43 (7), pp. 1115 - 1129 (2023)

Grandjean, J.; Desrosiers-Gregoire, G.; Anckaerts, C.; Angeles-Valdez, D.; Ayad, F.; Barrière, D.; Blockx, I.; Bortel, A.; Broadwater, M.; Cardoso, B. et al.; Célestine, M.; Chavez-Negrete, J.; Choi, S.; Christiaen, E.; Clavijo, P.; Colon-Perez, L.; Cramer, S.; Daniele, T.; Dempsey, E.; Diao, Y.; Doelemeyer, A.; Dopfel, D.; Dvořáková, L.; Falfán-Melgoza, C.; Fernandes, F.; Fowler, C. F.; Fuentes-Ibañez, A.; Garin, C.; Gelderman, E.; Golden, C.; Guo, C.; Henckens, M.; Hennessy, L.; Herman , P.; Hofwijks, N.; Horien, C.; Ionescu, T.; Jones, J.; Kaesser, J.; Kim, E.; Lambers, H.; Lazari, A.; Lee, S.; Lillywhite, A.; Liu, Y.; Liu, Y.; López-Castro, A.; López-Gil , X.; Ma, Z.; MacNicol, E.; Madularu, D.; Mandino, F.; Marciano, S.; McAuslan, M.; McCunn, P.; McIntosh, A.; Meng, X.; Meyer-Baese, L.; Missault, S.; Moro, F.; Naessens, D.; Nava-Gomez, L.; Nonaka, H.; Ortiz, J.; Paasonen, J.; Pais-Roldán, P.; Peeters, L.; Pereira, M.; Perez, P. D.; Pompilus, M.; Prior, M.; Rakhmatullin, R.; Reimann, H.; Reinwald, J.; Triana Del Rio, R.; Rivera-Olvera, A.; Ruiz-Pérez, D.; Russo, G.; Rutten, T.; Ryoke, R.; Sack, M.; Salvan, P.; Sanganahalli, B.; Schroeter, A.; Seewoo , B.; Selingue, E.; Seuwen, A.; Shi, B.; Sirmpilatze, N.; Smith, J.; Smith, C.; Sobczak, F.; Stenroos, P.; Straathof, M.; Strobelt, S.; Sumiyoshi, A.; Takahashi, K.; Torres-García, M.; Tudela, R.; van den Berg, M.; van der Marel, K.; van Hout, A.; Vertullo, R.; Vidal, B.; Vrooman, R.; Wang, X.; Wank, I.; Watson, D.; Yin, T.; Zhang, Y.; Zurbruegg, S.; Achard, S.; Alcauter, S.; Auer, D.; Barbier, E.; Baudewig, J.; Beckmann, C.; Beckmann, N.; Becq, G.; Blezer, E.; Bolbos, R.; Boretius, S.; Bouvard, S.; Budinger, E.; Buxbaum, J.; Cash, D.; Chapman, V.; Chuang, K.-H.; Ciobanu, L.; Coolen, B.; Dalley, J.; Dhenain, M.; Dijkhuizen, R.; Esteban, O.; Faber, C.; Febo, M.; Feindel, K.; Forloni, G.; Fouquet, J.; Garza-Villarreal, E.; Gass, N.; Glennon, J.; Gozzi, A.; Gröhn, O.; Harkin, A.; Heerschap, A.; Helluy, X.; Herfert , K.; Heuser, A.; Homberg, J.; Houwing, D.; Hyder, F.; Ielacqua, G.; Jelescu, I.; Johansen-Berg, H.; Kaneko, G.; Kawashima, R.; Keilholz, S.; Keliris, G.; Kelly, C.; Kerskens, C.; Khokhar, J.; Kind, P.; Langlois, J.-B.; Lerch, J.; López-Hidalgo, M.; Manahan-Vaughan, D.; Marchand, F.; Mars, R.; Marsella, G.; Micotti , E.; Muñoz-Moreno , E.; Near, J.; Niendorf, T.; Otte, W.; Pais-Roldán, P.; Pan , W.-J.; Prado-Alcalá, R.; Quirarte, G.; Rodger , J.; Rosenow, T.; Sampaio-Baptista, C.; Sartorius, A.; Sawiak, S.; Scheenen, T.; Shemesh; Shih, Y.-Y. I.; Shmuel, A.; Soria, G.; Stoop, R.; Takahashi, K.; Thompson, G.; Till, S.; Todd, N.; Van Der Linden, A.; van der Toorn, A.; van Tilborg, G.; Vanhove, C.; Veltien, A.; Verhoye, M.; Wachsmuth, L.; Weber-Fahr, W.; Wenk , P.; Yu, X.; Zerbi , V.; Zhang , N.; Zhang, B.; Zimmer, L.; Devenyi, G.; Chakravarty, M.; Hess, A.: Author Correction: A consensus protocol for functional connectivity analysis in the rat brain. Nature Neuroscience 26 (6), pp. 1127 - 1128 (2023)

Grandjean, J.; Desrosiers-Gregoire, G.; Anckaerts, C.; Angeles-Valdez, D.; Ayad, F.; Barrière, D.; Blockx, I.; Bortel, A.; Broadwater, M.; Cardoso, B. et al.; Célestine, M.; Chavez-Negrete, J.; Choi, S.; Christiaen, E.; Clavijo, P.; Colon-Perez, L.; Cramer, S.; Daniele, T.; Dempsey, E.; Diao, Y.; Doelemeyer, A.; Dopfel, D.; Dvořáková, L.; Falfán-Melgoza, C.; Fernandes, F.; Fowler, C. F.; Fuentes-Ibañez, A.; Garin, C.; Gelderman, E.; Golden, C.; Guo, C.; Henckens, M.; Hennessy, L.; Herman , P.; Hofwijks, N.; Horien, C.; Ionescu, T.; Jones, J.; Kaesser, J.; Kim, E.; Lambers, H.; Lazari, A.; Lee, S.; Lillywhite, A.; Liu, Y.; Liu, Y.; López-Castro, A.; López-Gil , X.; Ma, Z.; MacNicol, E.; Madularu, D.; Mandino, F.; Marciano, S.; McAuslan, M.; McCunn, P.; McIntosh, A.; Meng, X.; Meyer-Baese, L.; Missault, S.; Moro, F.; Naessens, D.; Nava-Gomez, L.; Nonaka, H.; Ortiz, J.; Paasonen, J.; Pais-Roldán, P.; Peeters, L.; Pereira, M.; Perez, P. D.; Pompilus, M.; Prior, M.; Rakhmatullin, R.; Reimann, H.; Reinwald, J.; Triana Del Rio, R.; Rivera-Olvera, A.; Ruiz-Pérez, D.; Russo, G.; Rutten, T.; Ryoke, R.; Sack, M.; Salvan, P.; Sanganahalli, B.; Schroeter, A.; Seewoo , B.; Selingue, E.; Seuwen, A.; Shi, B.; Sirmpilatze, N.; Smith, J.; Smith, C.; Sobczak, F.; Stenroos, P.; Straathof, M.; Strobelt, S.; Sumiyoshi, A.; Takahashi, K.; Torres-García, M.; Tudela, R.; van den Berg, M.; van der Marel, K.; van Hout, A.; Vertullo, R.; Vidal, B.; Vrooman, R.; Wang, X.; Wank, I.; Watson, D.; Yin, T.; Zhang, Y.; Zurbruegg, S.; Achard, S.; Alcauter, S.; Auer, D.; Barbier, E.; Baudewig, J.; Beckmann, C.; Beckmann, N.; Becq, G.; Blezer, E.; Bolbos, R.; Boretius, S.; Bouvard, S.; Budinger, E.; Buxbaum, J.; Cash, D.; Chapman, V.; Chuang, K.-H.; Ciobanu, L.; Coolen, B.; Dalley, J.; Dhenain, M.; Dijkhuizen, R.; Esteban, O.; Faber, C.; Febo, M.; Feindel, K.; Forloni, G.; Fouquet, J.; Garza-Villarreal, E.; Gass, N.; Glennon, J.; Gozzi, A.; Gröhn, O.; Harkin, A.; Heerschap, A.; Helluy, X.; Herfert , K.; Heuser, A.; Homberg, J.; Houwing, D.; Hyder, F.; Ielacqua, G.; Jelescu, I.; Johansen-Berg, H.; Kaneko, G.; Kawashima, R.; Keilholz, S.; Keliris, G.; Kelly, C.; Kerskens, C.; Khokhar, J.; Kind, P.; Langlois, J.-B.; Lerch, J.; López-Hidalgo, M.; Manahan-Vaughan, D.; Marchand, F.; Mars, R.; Marsella, G.; Micotti , E.; Muñoz-Moreno , E.; Near, J.; Niendorf, T.; Otte, W.; Pais-Roldán, P.; Pan , W.-J.; Prado-Alcalá, R.; Quirarte, G.; Rodger , J.; Rosenow, T.; Sampaio-Baptista, C.; Sartorius, A.; Sawiak, S.; Scheenen, T.; Shemesh; Shih, Y.-Y. I.; Shmuel, A.; Soria, G.; Stoop, R.; Takahashi, K.; Thompson, G.; Till, S.; Todd, N.; Van Der Linden, A.; van der Toorn, A.; van Tilborg, G.; Vanhove, C.; Veltien, A.; Verhoye, M.; Wachsmuth, L.; Weber-Fahr, W.; Wenk , P.; Yu, X.; Zerbi , V.; Zhang , N.; Zhang, B.; Zimmer, L.; Devenyi, G.; Chakravarty, M.; Hess, A.: A consensus protocol for functional connectivity analysis in the rat brain. Nature Neuroscience 26 (4), pp. 673 - 681 (2023)

Chen, X.; Jiang, Y.; Choi, S.; Pohmann, R.; Scheffler, K.; Kleinfeld, D.; Yu, X.: Correction: Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. PLoS Biology 20 (12), e3001951 (2022)

Choi, S.; Zeng, H.; Chen, Y.; Sobczak, F.; Qian, C.; Yu, X.: Laminar-specific functional connectivity mapping with multi-slice line-scanning fMRI. Cerebral Cortex 32 (20), pp. 4492 - 4501 (2022)

Grandjean, J.; Desrosiers-Gregoire, G.; Anckaerts, C.; Angeles-Valdez, D.; Ayad, F.; Barrière, D.; Blockx, I.; Bortel, A.; Broadwater, M.; Cardoso, B. et al.; Célestine, M.; Chavez-Negrete, J.; Choi, S.; Christiaen, E.; Clavijo, P.; Colon-Perez, L.; Cramer, S.; Daniele, T.; Dempsey, E.; Diao, Y.; Doelemeyer, A.; Dopfel, D.; Dvořáková, L.; Falfán-Melgoza, C.; Fernandes, F.; Fowler, C.; Fuentes-Ibañez, A.; Garin, C.; Gelderman, E.; Golden, C. E.; Guo, C. C.; Henckens, M. J.; Hennessy, L. A.; Herman, P.; Hofwijks, N.; Horien, C.; Ionescu, T. M.; Jones, J.; Kaesser, J.; Kim, E.; Lambers, H.; Lazari, A.; Lee, S.-H.; Lillywhite, A.; Liu, Y.; Liu, Y. Y.; López-Castro, A.; López-Gil, X.; Ma, Z.; MacNicol, E.; Madularu, D.; Mandino, F.; Marciano, S.; McAuslan, M. J.; McCunn, P.; McIntosh, A.; Meng, X.; Meyer-Baese, L.; Missault, S.; Moro, F.; Naessens, D.; Nava-Gomez, L. J.; Nonaka, H.; Ortiz, J. J.; Paasonen, J.; Peeters, L. M.; Pereira, M.; Perez, P. D.; Pompilus, M.; Prior, M.; Rakhmatullin, R.; Reimann, H. M.; Reinwald, J.; de Rio, R. T.; Rivera-Olvera, A.; Ruiz-Pérez, D.; Russo, G.; Rutten, T. J.; Ryoke, R.; Sack, M.; Salvan, P.; Sanganahalli, B. G.; Schroeter, A.; Seewoo, B. J.; Selingue, E.; Seuwen, A.; Shi, B.; Sirmpilatze, N.; Smith, J. A.; Smith, C.; Sobczak, F.; Stenroos, P. J.; Straathof, M.; Strobelt, S.; Sumiyoshi, A.; Takahashi, K.; Torres-Garcia, M.; Tudela, R.; van den Berg, M.; van der Marel, K.; van Hout, A. T.; Vertullo, R.; Vidal, B.; Vrooman, R. M.; Wang, V. X.; Wank, I.; Watson, D. J.; Yin, T.; Zhang, Y.; Zurbruegg, S.; Achard, S.; Alcauter, S.; Auer, D. P.; Barbier, E. L.; Baudewig, J.; Beckmann, C. F.; Beckmann, N.; Becq, G. J.; Blezer, E. L.; Bolbos, R.; Boretius, S.; Bouvard, S.; Budinger, E.; Buxbaum, J. D.; Cash, D.; Chapman, V.; Chuang, K.-H.; Ciobanu, L.; Coolen, B.; Dalley, J. W.; Dhenain, M.; Dijkhuizen, R. M.; Esteban, O.; Faber, C.; Febo, M.; Feindel, K. W.; Forloni, G.; Fouquet, J.; Garza-Villarreal, E. A.; Gass, N.; Glennon, J. C.; Gozzi, A.; Gröhn, O.; Harkin, A.; Heerschap, A.; Helluy, X.; Herfert, K.; Heuser, A.; Homberg, J. R.; Houwing, D. J.; Hyder, F.; Ielacqua, G. D.; Jelescu, I. O.; Johansen-Berg, H.; Kaneko, G.; Kawashima, R.; Keilholz, S. D.; Keliris, G. A.; Kelly, C.; Kerskens, C.; Khokhar, J. Y.; Kind, P. C.; Langlois, J.-B.; Lerch, J. P.; López-Hidalgo, M. A.; Manahan-Vaughan, D.; Marchand, F.; Mars, R. B.; Marsella, G.; Micotti, E.; Muñoz-Moreno, E.; Near, J.; Niendorf, T.; Otte, W. M.; Pais, P.; Pan, W.-J.; Prado-Alcalá, R. A.; Quirarte, G. L.; Rodger, J.; Rosenow, T.; Baptista, C. S.; Sartorius, A.; Sawiak, S. J.; Scheenen, T. W.; Shemesh, N.; Shih, Y.-Y. I.; Shmuel, A.; Soria, G.; Stoop, R.; Thompson, G. J.; Till, S. M.; Todd, N.; Van Der Linden, A.; van der Toorn, A.; van Tilborg, G. A.; Vanhove, C.; Veltien, A.; Verhoye, M.; Wachsmuth, L.; Weber-Fahr, W.; Wenk, P.; Yu, X.; Zerbi, V.; Zhang, N.; Zhang, B. B.; Zimmer, L.; Devenyi, G. A.; Chakravarty, M. M.; Hess, A.: StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain. (submitted)

Chen, Y.; Wang, Q.; Choi, S.; Zeng, H.; Takahashi, K.; Qian, C.; Yu, X.: Focal fMRI signal enhancement with implantable inductively coupled detectors. NeuroImage 247, 118793 (2022)

Chen, X.; Jiang, Y.; Choi, S.; Pohmann, R.; Scheffler, K.; Kleinfeld, D.; Yu, X.: Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. PLoS Biology 19 (9), e3000923 (2021)

Choi, S.; Takahashi, K.; Jiang, Y.; Köhler, S.; Zeng, H.; Wang, Q.; Ma, Y.; Yu, X.: Real-Time fMRI Brain Mapping in Animals. Journal of Visualized Experiments 2020 (163) (2020)

Chen, Y.; Wang, Q.; Zeng, H.; Takahashi, K.; Choi, S.; Qian, C.; Yu, X.: Inductively coupled detectors for optogenetic-driven focal and multiregional fMRI signal enhancement. In 2021 ISMRM & SMRT Annual Meeting & Exhibition (ISMRM 2021), 0133. 2021 ISMRM & SMRT Annual Meeting & Exhibition (ISMRM 2021), May 15, 2021 - May 20, 2021. (2021)

Choi, S.; Chen, Y.; Zeng, H.; Yu, X.: Characterize laminar-specific interhemispheric functional coherence in resting-state fMRI using bilateral line-scanning fMRI (BiLS). In 2021 ISMRM & SMRT Annual Meeting & Exhibition (ISMRM 2021), 0514. 2021 ISMRM & SMRT Annual Meeting & Exhibition (ISMRM 2021), May 15, 2021 - May 20, 2021. (2021)

Choi, S.; Zeng, H.; Biswal, B.; Rosen, B.; Yu, X.: Distinguish hemodynamic responses at the white matter tract from the laminar-specific gray matter fMRI signal with line-scanning fMRI. In 2020 ISMRM & SMRT Virtual Conference & Exhibition, 1354, p. 496. 2020 ISMRM & SMRT Virtual Conference & Exhibition, August 08, 2020 - August 14, 2020. (2020)

Choi, S.; Zeng, H.; Pohmann, R.; Scheffler, K.; Yu, X.: Novel alpha-180 SE based LINE-scanning method (SELINE) for laminar-specific fMRI. In ISMRM 27th Annual Meeting & Exhibition, 1166. 27th Annual Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine (ISMRM 2019), Montréal, QC, Canada, May 11, 2019 - May 16, 2019. (2019)

Zeng, H.; Choi, S.; Sobczak, F.; Rosen, B.; Yu, X.: Concurrent intracellular calcium recordings with laminar fMRI mapping. In ISMRM 27th Annual Meeting & Exhibition, 0611. 27th Annual Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine (ISMRM 2019), Montréal, QC, Canada, May 11, 2019 - May 16, 2019. (2019)

Choi, S.: Deciphering laminar specific features and vascular driven contributions with multimodal translation in both evoked and resting-state fMRI. BS Center for Neuroscience Imaging Research, Suwon, South Korea (2020)

Choi, S.; Heule, R.; Leks, E.; Glang, F.; Yu, X.; Scheffler, K.: Calibration kernels with Alternative Sampling Scheme (CASS) for Parallel Imaging: SENSE meets CASS. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting (ISMRM 2022), London, UK (2022)

Choi, S.; Yu, X.; Scheffler, K.; Herz, K.: Simultaneous acquisition of GRE- and SE-type resting-state fMRI signals with GRASE-based line-scanning in the human brain. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting (ISMRM 2022), London, UK (2022)

Choi, S.; Yu, X.: Characterize laminar-specific features of inter hemispheric functional connectivity with bilateral line-scanning fMRI. 50th Annual Meeting of the Society for Neuroscience (Neuroscience 2021) (2021)